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1EX7

CRYSTAL STRUCTURE OF YEAST GUANYLATE KINASE IN COMPLEX WITH GUANOSINE-5'-MONOPHOSPHATE

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004385molecular_functionGMP kinase activity
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006163biological_processpurine nucleotide metabolic process
A0009150biological_processpurine ribonucleotide metabolic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0046037biological_processGMP metabolic process
A0046711biological_processGDP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 188
ChainResidue
ATHR12
AGLY13
ASER60
ALYS63
AASN168
ALEU171
AHOH230
AHOH235

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 189
ChainResidue
AGLY11
ATHR12
AGLY13
ALYS14
ASER15
AARG135
AHOH253
AHOH329
ASER10

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 5GP A 187
ChainResidue
ASER34
AARG38
AARG41
ATYR50
AGLU69
ATYR78
AGLY79
ASER80
AILE99
AASP100
AGLY103
AHOH213
AHOH248
AHOH344
AHOH390

Functional Information from PROSITE/UniProt
site_idPS00856
Number of Residues18
DetailsGUANYLATE_KINASE_1 Guanylate kinase-like signature. TTRtpRagEvnGkdYnFV
ChainResidueDetails
ATHR36-VAL53

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues182
DetailsDomain: {"description":"Guanylate kinase-like","evidences":[{"source":"PROSITE-ProRule","id":"PRU00100","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00100","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues9
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"1314905","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"1967656","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1GKY","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"1314905","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"2551688","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17287358","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"18407956","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"Phosphotyrosine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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