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1E9F

Mutant human thymidylate kinase complexed with TMP and ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004798molecular_functiondTMP kinase activity
A0005524molecular_functionATP binding
A0006233biological_processdTDP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 401
ChainResidue
ASER20
AADP302
AHOH2014
AHOH2082
AHOH2155
AHOH2156

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH2089
AHOH2093
AHOH2093
AHOH2040
AHOH2040
AHOH2089

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE TMP A 301
ChainResidue
AASP15
APHE42
ALEU57
APHE72
AARG76
AARG97
AGLY102
APHE105
AHOH2037
AHOH2082
AHOH2153
AHOH2154
AHOH2155

site_idAC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ADP A 302
ChainResidue
AGLY16
AALA17
AGLY18
ALYS19
ASER20
ATHR21
AARG143
ALYS182
ASER183
AILE184
AARG192
AMG401
AHOH2107
AHOH2155
AHOH2156
AHOH2157
AHOH2158
AHOH2160
AHOH2161
AHOH2162

Functional Information from PROSITE/UniProt
site_idPS01331
Number of Residues13
DetailsTHYMIDYLATE_KINASE Thymidylate kinase signature. VVDRYafSGvAFT
ChainResidueDetails
AVAL94-THR106

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues13
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"9826650","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12614151","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1NMX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NMY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NN0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NN3","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PDB","id":"1NMX","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NMY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NN0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NN3","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PDB","id":"1NMY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NMZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NN1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1NN5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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