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1E9F

Mutant human thymidylate kinase complexed with TMP and ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004798molecular_functionthymidylate kinase activity
A0005524molecular_functionATP binding
A0006233biological_processdTDP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 401
ChainResidue
ASER20
AADP302
AHOH2014
AHOH2082
AHOH2155
AHOH2156

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH2089
AHOH2093
AHOH2093
AHOH2040
AHOH2040
AHOH2089

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE TMP A 301
ChainResidue
AASP15
APHE42
ALEU57
APHE72
AARG76
AARG97
AGLY102
APHE105
AHOH2037
AHOH2082
AHOH2153
AHOH2154
AHOH2155

site_idAC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ADP A 302
ChainResidue
AGLY16
AALA17
AGLY18
ALYS19
ASER20
ATHR21
AARG143
ALYS182
ASER183
AILE184
AARG192
AMG401
AHOH2107
AHOH2155
AHOH2156
AHOH2157
AHOH2158
AHOH2160
AHOH2161
AHOH2162

Functional Information from PROSITE/UniProt
site_idPS01331
Number of Residues13
DetailsTHYMIDYLATE_KINASE Thymidylate kinase signature. VVDRYafSGvAFT
ChainResidueDetails
AVAL94-THR106

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:12614151, ECO:0007744|PDB:1NMX, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NN0, ECO:0007744|PDB:1NN3
ChainResidueDetails
AGLY16

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:12614151, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NMZ, ECO:0007744|PDB:1NN1
ChainResidueDetails
AARG97

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:1NMX, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NN0, ECO:0007744|PDB:1NN3
ChainResidueDetails
ALYS182

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NMZ, ECO:0007744|PDB:1NN1, ECO:0007744|PDB:1NN5
ChainResidueDetails
AARG192

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:19413330
ChainResidueDetails
AALA2

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS169

site_idSWS_FT_FI7
Number of Residues1
DetailsSITE: Transition state stabilizer => ECO:0000269|PubMed:9826650
ChainResidueDetails
AARG147

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PDB entries from 2024-10-30

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