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1E9E

Mutant human thymidylate kinase (F105Y) complexed with dTMP and ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004550molecular_functionnucleoside diphosphate kinase activity
A0004798molecular_functionthymidylate kinase activity
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005829cellular_componentcytosol
A0006227biological_processdUDP biosynthetic process
A0006233biological_processdTDP biosynthetic process
A0006235biological_processdTTP biosynthetic process
A0009165biological_processnucleotide biosynthetic process
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0043627biological_processresponse to estrogen
A0045445biological_processmyoblast differentiation
A0046105biological_processthymidine biosynthetic process
A0046686biological_processresponse to cadmium ion
A0046940biological_processnucleoside monophosphate phosphorylation
A0071363biological_processcellular response to growth factor stimulus
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 401
ChainResidue
ASER20
AADP302
AHOH2032
AHOH2144
AHOH2293
AHOH2296

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH2163
AHOH2164
AHOH2164
AHOH2067
AHOH2067
AHOH2163

site_idAC3
Number of Residues19
DetailsBINDING SITE FOR RESIDUE TMP A 301
ChainResidue
APHE42
APRO43
AARG45
ALEU57
APHE72
AARG76
AARG97
AGLY102
ATYR105
ATYR151
AHOH2144
AHOH2288
AHOH2289
AHOH2290
AHOH2291
AHOH2292
AHOH2293
AHOH2294
AHOH2295

site_idAC4
Number of Residues27
DetailsBINDING SITE FOR RESIDUE ADP A 302
ChainResidue
AARG16
AALA17
AGLY18
ALYS19
ASER20
ATHR21
AARG143
ALYS182
ASER183
AILE184
AARG192
AGLU196
AMG401
AHOH2144
AHOH2293
AHOH2296
AHOH2297
AHOH2298
AHOH2299
AHOH2300
AHOH2301
AHOH2302
AHOH2303
AHOH2305
AHOH2306
AHOH2307
AHOH2308

Functional Information from PROSITE/UniProt
site_idPS01331
Number of Residues13
DetailsTHYMIDYLATE_KINASE Thymidylate kinase signature. VVDRYafSGvAYT
ChainResidueDetails
AVAL94-THR106

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:12614151, ECO:0007744|PDB:1NMX, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NN0, ECO:0007744|PDB:1NN3
ChainResidueDetails
AARG16

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000269|PubMed:12614151, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NMZ, ECO:0007744|PDB:1NN1
ChainResidueDetails
AARG97

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:1NMX, ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NN0, ECO:0007744|PDB:1NN3
ChainResidueDetails
ALYS182

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:1NMY, ECO:0007744|PDB:1NMZ, ECO:0007744|PDB:1NN1, ECO:0007744|PDB:1NN5
ChainResidueDetails
AARG192

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:19413330
ChainResidueDetails
AALA2

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS169

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PDB entries from 2024-10-30

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