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1DWQ

Crystal Structure of Hydroxynitrile Lyase from Manihot esculenta in Complex with Substrates Acetone and Chloroacetone:Implications for the Mechanism of Cyanogenesis

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0047606molecular_function(S)-hydroxynitrile lyase activity
A0052891molecular_functionaliphatic (S)-hydroxynitrile lyase activity
A0052892molecular_functionaromatic (S)-hydroxynitrile lyase activity
B0003824molecular_functioncatalytic activity
B0047606molecular_function(S)-hydroxynitrile lyase activity
B0052891molecular_functionaliphatic (S)-hydroxynitrile lyase activity
B0052892molecular_functionaromatic (S)-hydroxynitrile lyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE ATO A1259
ChainResidue
ATHR11
AHOH2093
AILE12
AHIS14
ASER80
ACSA81
ALEU158
AILE210
APHE211
AHIS236

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor/acceptor","evidences":[{"source":"PubMed","id":"11173464","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"11316882","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"11173464","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DWO","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Increases basicity of active site His","evidences":[{"source":"PubMed","id":"11316882","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1c4x
ChainResidueDetails
ASER80
AHIS236
AASP208
ATHR11

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1c4x
ChainResidueDetails
BSER80
BHIS236
BASP208
BTHR11

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1c4x
ChainResidueDetails
ASER80
AHIS236
AASP208

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1c4x
ChainResidueDetails
BSER80
BHIS236
BASP208

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PDB entries from 2026-03-25

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