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1DVJ

CRYSTAL STRUCTURE OF OROTIDINE MONOPHOSPHATE DECARBOXYLASE COMPLEXED WITH 6-AZAUMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016829molecular_functionlyase activity
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016829molecular_functionlyase activity
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
C0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
C0005829cellular_componentcytosol
C0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
C0006221biological_processpyrimidine nucleotide biosynthetic process
C0016829molecular_functionlyase activity
C0016831molecular_functioncarboxy-lyase activity
C0044205biological_process'de novo' UMP biosynthetic process
D0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
D0005829cellular_componentcytosol
D0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
D0006221biological_processpyrimidine nucleotide biosynthetic process
D0016829molecular_functionlyase activity
D0016831molecular_functioncarboxy-lyase activity
D0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE UP6 A 5001
ChainResidue
AASP20
AHOH4001
AHOH4016
AHOH4065
AHOH4068
AHOH4076
AHOH4125
AHOH4140
ALYS42
ALYS72
AMET126
ASER127
APRO180
AGLN185
AGLY202
AARG203

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UP6 B 5002
ChainResidue
BASP20
BLYS42
BLYS72
BMET126
BSER127
BPRO180
BGLN185
BGLY202
BARG203
BHOH4024
BHOH4025
BHOH4028
BHOH4036
BHOH4081
BHOH4142

site_idAC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE UP6 C 5003
ChainResidue
CASP20
CLYS42
CLYS72
CMET126
CSER127
CPRO180
CGLN185
CGLY202
CARG203
CHOH4003
CHOH4012
CHOH4021
CHOH4023
CHOH4066
CHOH4101
CHOH4139

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UP6 D 5004
ChainResidue
DASP20
DLYS42
DLYS72
DMET126
DSER127
DPRO180
DGLY202
DARG203
DHOH4004
DHOH4007
DHOH4020
DHOH4032
DHOH4044
DHOH4050
DHOH4053

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IIaDfKvaDIPeTN
ChainResidueDetails
AILE67-ASN80

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton donor
ChainResidueDetails
ALYS72
BLYS72
CLYS72
DLYS72

site_idSWS_FT_FI2
Number of Residues28
DetailsBINDING:
ChainResidueDetails
AASP20
BASP70
BSER127
BPRO180
BGLY202
BARG203
CASP20
CLYS42
CASP70
CSER127
CPRO180
ALYS42
CGLY202
CARG203
DASP20
DLYS42
DASP70
DSER127
DPRO180
DGLY202
DARG203
AASP70
ASER127
APRO180
AGLY202
AARG203
BASP20
BLYS42

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PDB entries from 2024-03-27

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