Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008483 | molecular_function | transaminase activity |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
A | 0047432 | molecular_function | 2,2-dialkylglycine decarboxylase (pyruvate) activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE RB A 435 |
Chain | Residue |
A | ALA95 |
A | THR98 |
A | PRO99 |
A | PRO100 |
A | LEU102 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE RB A 436 |
Chain | Residue |
A | LEU78 |
A | SER80 |
A | THR303 |
A | VAL305 |
A | ASP307 |
A | HOH531 |
site_id | AC3 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PLP A 437 |
Chain | Residue |
A | THR110 |
A | GLY111 |
A | ALA112 |
A | TRP138 |
A | HIS139 |
A | GLU210 |
A | ASP243 |
A | ALA245 |
A | GLN246 |
A | LYS272 |
A | THR302 |
A | THR303 |
A | MES434 |
A | HOH519 |
A | HOH536 |
A | HOH543 |
A | HOH569 |
site_id | AC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE MES A 434 |
Chain | Residue |
A | GLN52 |
A | TRP138 |
A | SER215 |
A | GLN246 |
A | LYS272 |
A | TYR301 |
A | ARG406 |
A | PLP437 |
site_id | ACT |
Number of Residues | 22 |
Details | ACTIVE SITE: THE COFACTOR PLP IS COVALENTLY BOUND |
Chain | Residue |
A | GLN52 |
A | GLU210 |
A | SER214 |
A | SER215 |
A | ASP243 |
A | ALA245 |
A | GLN246 |
A | LYS272 |
A | PLP437 |
A | TYR301 |
A | THR303 |
A | MET53 |
A | ASN394 |
A | ARG406 |
A | MES434 |
A | PHE79 |
A | THR110 |
A | GLY111 |
A | ASN115 |
A | SER137 |
A | TRP138 |
A | MET141 |
site_id | ME1 |
Number of Residues | 7 |
Details | METAL BINDING SITE 1 (NEAR THE ACTIVE SITE): LIGANDS TO THE RB+ ION ARE INDICATED |
Chain | Residue |
A | LEU78 |
A | SER80 |
A | THR303 |
A | VAL305 |
A | ASP307 |
A | HOH531 |
A | RB436 |
site_id | ME2 |
Number of Residues | 6 |
Details | METAL BINDING SITE 2: LIGANDS TO THE RB+ ION ARE INDICATED |
Chain | Residue |
A | ALA95 |
A | THR98 |
A | PRO99 |
A | LEU102 |
A | HOH578 |
A | RB435 |
Functional Information from PROSITE/UniProt
site_id | PS00600 |
Number of Residues | 38 |
Details | AA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. LIlDEAqt.GVgRtGtmfacqrdgvtp....DILtlSKtlgAG |
Chain | Residue | Details |
A | LEU240-GLY277 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 1 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine |
Chain | Residue | Details |
A | THR273 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1b8g |
Chain | Residue | Details |
A | TRP138 | |
A | ASP243 | |
site_id | CSA2 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1b8g |
Chain | Residue | Details |
A | LYS272 | |
A | TRP138 | |
A | ASP243 | |
site_id | CSA3 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1b8g |
Chain | Residue | Details |
A | LYS272 | |
A | ASP243 | |
A | TYR173 | |
site_id | MCSA1 |
Number of Residues | 6 |
Details | M-CSA 482 |
Chain | Residue | Details |
A | HIS139 | steric role |
A | PRO211 | steric role, transition state stabiliser |
A | GLU244 | electrostatic stabiliser, increase electrophilicity |
A | THR247 | electrostatic stabiliser |
A | THR273 | covalent catalysis, proton shuttle (general acid/base) |
A | ILE407 | steric role, transition state stabiliser |