1DFU
CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION
Functional Information from GO Data
Chain | GOid | namespace | contents |
P | 0000027 | biological_process | ribosomal large subunit assembly |
P | 0002181 | biological_process | cytoplasmic translation |
P | 0003723 | molecular_function | RNA binding |
P | 0003735 | molecular_function | structural constituent of ribosome |
P | 0005737 | cellular_component | cytoplasm |
P | 0005829 | cellular_component | cytosol |
P | 0005840 | cellular_component | ribosome |
P | 0006412 | biological_process | translation |
P | 0008097 | molecular_function | 5S rRNA binding |
P | 0009314 | biological_process | response to radiation |
P | 0017148 | biological_process | negative regulation of translation |
P | 0019843 | molecular_function | rRNA binding |
P | 0022625 | cellular_component | cytosolic large ribosomal subunit |
P | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG M 501 |
Chain | Residue |
M | U95 |
M | HOH518 |
M | HOH525 |
M | HOH529 |
N | HOH520 |
P | HOH131 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG M 502 |
Chain | Residue |
M | HOH541 |
M | HOH552 |
M | HOH571 |
N | HOH539 |
M | G100 |
M | MG505 |
M | HOH510 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG M 503 |
Chain | Residue |
M | HOH550 |
M | HOH550 |
M | HOH569 |
M | HOH583 |
M | HOH584 |
M | HOH586 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG N 504 |
Chain | Residue |
M | HOH536 |
N | HOH507 |
N | HOH527 |
N | HOH528 |
N | HOH530 |
N | HOH568 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG M 505 |
Chain | Residue |
M | G102 |
M | MG502 |
M | HOH507 |
M | HOH510 |
M | HOH527 |
M | HOH535 |
M | HOH552 |