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1D2E

CRYSTAL STRUCTURE OF MITOCHONDRIAL EF-TU IN COMPLEX WITH GDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0006414biological_processtranslational elongation
B0003746molecular_functiontranslation elongation factor activity
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
B0006414biological_processtranslational elongation
C0003746molecular_functiontranslation elongation factor activity
C0003924molecular_functionGTPase activity
C0005525molecular_functionGTP binding
C0006414biological_processtranslational elongation
D0003746molecular_functiontranslation elongation factor activity
D0003924molecular_functionGTPase activity
D0005525molecular_functionGTP binding
D0006414biological_processtranslational elongation
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 501
ChainResidue
ATHR71
AGDP1301
AHOH1685
AHOH1686
AHOH1687
AHOH1688

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 502
ChainResidue
BHOH1574
BHOH1575
BHOH1576
BTHR71
BGDP1302
BHOH1573

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 503
ChainResidue
CTHR71
CGDP1303
CHOH1595
CHOH1596
CHOH1597
CHOH1598

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG D 504
ChainResidue
DTHR71
DGDP1304
DHOH1548
DHOH1549

site_idAC5
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GDP A 1301
ChainResidue
AHIS65
AASP67
AHIS68
AGLY69
ALYS70
ATHR71
ATHR72
ATYR92
AASN181
ALYS182
AASP184
ASER219
AALA220
ALEU221
AMG501
AHOH1324
AHOH1335
AHOH1336
AHOH1353
AHOH1380
AHOH1417
AHOH1523
AHOH1686
AHOH1688

site_idAC6
Number of Residues18
DetailsBINDING SITE FOR RESIDUE GDP B 1302
ChainResidue
BASP67
BHIS68
BGLY69
BLYS70
BTHR71
BTHR72
BTYR92
BASN181
BLYS182
BASP184
BSER219
BALA220
BLEU221
BMG502
BHOH1395
BHOH1529
BHOH1574
BHOH1576

site_idAC7
Number of Residues22
DetailsBINDING SITE FOR RESIDUE GDP C 1303
ChainResidue
CVAL66
CASP67
CHIS68
CGLY69
CLYS70
CTHR71
CTHR72
CTYR92
CASN181
CLYS182
CASP184
CSER219
CALA220
CLEU221
CMG503
CHOH1356
CHOH1517
CHOH1550
CHOH1551
CHOH1564
CHOH1596
CHOH1598

site_idAC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE GDP D 1304
ChainResidue
DMG504
DHOH1368
DHOH1548
DASP67
DHIS68
DGLY69
DLYS70
DTHR71
DTHR72
DTYR92
DASN181
DLYS182
DASP184
DSER219
DALA220
DLEU221

Functional Information from PROSITE/UniProt
site_idPS00301
Number of Residues16
DetailsG_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DNapeERaRGITInaA
ChainResidueDetails
AASP96-ALA111

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues784
DetailsDomain: {"description":"tr-type G","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues28
DetailsRegion: {"description":"G1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues16
DetailsRegion: {"description":"G2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues12
DetailsRegion: {"description":"G3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues12
DetailsRegion: {"description":"G4","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues8
DetailsRegion: {"description":"G5","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues40
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P0CE47","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues12
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P49411","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues4
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q8BFR5","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues8
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q8BFR5","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues4
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"UniProtKB","id":"P49411","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI12
Number of Residues4
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q8BFR5","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI13
Number of Residues4
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q8BFR5","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AASP67

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BASP67

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CASP67

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
DASP67

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AHIS130

site_idCSA6
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BHIS130

site_idCSA7
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CHIS130

site_idCSA8
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
DHIS130

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PDB entries from 2025-12-10

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