Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

1C7O

CRYSTAL STRUCTURE OF CYSTALYSIN FROM TREPONEMA DENTICOLA CONTAINS A PYRIDOXAL 5'-PHOSPHATE-L-AMINOETHOXYVINYLGLYCINE COMPLEX

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0009058	biological_process	biosynthetic process
A	0016829	molecular_function	lyase activity
A	0030170	molecular_function	pyridoxal phosphate binding
B	0009058	biological_process	biosynthetic process
B	0016829	molecular_function	lyase activity
B	0030170	molecular_function	pyridoxal phosphate binding
C	0009058	biological_process	biosynthetic process
C	0016829	molecular_function	lyase activity
C	0030170	molecular_function	pyridoxal phosphate binding
D	0009058	biological_process	biosynthetic process
D	0016829	molecular_function	lyase activity
D	0030170	molecular_function	pyridoxal phosphate binding
E	0009058	biological_process	biosynthetic process
E	0016829	molecular_function	lyase activity
E	0030170	molecular_function	pyridoxal phosphate binding
F	0009058	biological_process	biosynthetic process
F	0016829	molecular_function	lyase activity
F	0030170	molecular_function	pyridoxal phosphate binding
G	0009058	biological_process	biosynthetic process
G	0016829	molecular_function	lyase activity
G	0030170	molecular_function	pyridoxal phosphate binding
H	0009058	biological_process	biosynthetic process
H	0016829	molecular_function	lyase activity
H	0030170	molecular_function	pyridoxal phosphate binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	16
Details	BINDING SITE FOR RESIDUE PPG A 1500

Chain	Residue
A	LEU17
A	ASP203
A	ILE205
A	HIS206
A	LYS238
A	ARG369
A	HOH1551
B	TYR64
A	VAL38
A	ALA39
A	GLY97
A	VAL98
A	VAL99
A	TYR123
A	CYS171
A	ASN175

site_id	AC2
Number of Residues	16
Details	BINDING SITE FOR RESIDUE PPG B 2500

Chain	Residue
A	TYR64
A	PHE273
B	LEU17
B	ALA39
B	GLY97
B	VAL98
B	VAL99
B	TYR123
B	CYS171
B	ASN175
B	ASP203
B	ILE205
B	HIS206
B	LYS238
B	ARG369
B	HOH2544

site_id	AC3
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PPG C 3500

Chain	Residue
C	LEU17
C	VAL38
C	ALA39
C	GLY97
C	VAL98
C	VAL99
C	TYR123
C	CYS171
C	ASN175
C	ASP203
C	ILE205
C	HIS206
C	LYS238
C	ASP355
C	ARG369
C	HOH3548
C	HOH3633
D	TYR64
D	PHE273

site_id	AC4
Number of Residues	19
Details	BINDING SITE FOR RESIDUE PPG D 4500

Chain	Residue
C	TYR64
C	PHE273
D	LEU17
D	VAL38
D	ALA39
D	GLY97
D	VAL98
D	VAL99
D	PRO100
D	TYR123
D	CYS171
D	ASN175
D	ASP203
D	ILE205
D	HIS206
D	LYS238
D	ASP355
D	ARG369
D	HOH4572

site_id	AC5
Number of Residues	13
Details	BINDING SITE FOR RESIDUE PPG E 5500

Chain	Residue
E	ALA39
E	GLY97
E	VAL98
E	VAL99
E	TYR123
E	CYS171
E	ASN175
E	ASP203
E	ILE205
E	HIS206
E	LYS238
E	ARG369
F	TYR64

site_id	AC6
Number of Residues	18
Details	BINDING SITE FOR RESIDUE PPG F 6500

Chain	Residue
F	HOH6550
F	HOH6662
E	TYR64
F	LEU17
F	VAL38
F	ALA39
F	GLY97
F	VAL98
F	VAL99
F	TYR123
F	CYS171
F	ASN175
F	ASP203
F	ILE205
F	HIS206
F	LYS238
F	ARG369
F	HOH6545

site_id	AC7
Number of Residues	17
Details	BINDING SITE FOR RESIDUE PPG G 7500

Chain	Residue
G	LEU17
G	VAL38
G	ALA39
G	GLY97
G	VAL98
G	VAL99
G	TYR123
G	TYR124
G	CYS171
G	ASN175
G	ASP203
G	ILE205
G	HIS206
G	SER237
G	LYS238
G	ARG369
H	TYR64

site_id	AC8
Number of Residues	18
Details	BINDING SITE FOR RESIDUE PPG H 8500

Chain	Residue
G	TYR64
H	LEU17
H	VAL38
H	ALA39
H	GLY97
H	VAL98
H	VAL99
H	TYR123
H	CYS171
H	ASN175
H	ASP203
H	ILE205
H	HIS206
H	LYS238
H	ARG369
H	HOH8514
H	HOH8522
H	HOH8556

Catalytic Information from CSA

site_id	CSA1
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
A	LYS238
A	TYR123
A	ASP203

site_id	CSA10
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
B	LYS238
B	TYR124
B	ASP203

site_id	CSA11
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
C	LYS238
C	TYR124
C	ASP203

site_id	CSA12
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
D	LYS238
D	TYR124
D	ASP203

site_id	CSA13
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
E	LYS238
E	TYR124
E	ASP203

site_id	CSA14
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
F	LYS238
F	TYR124
F	ASP203

site_id	CSA15
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
G	LYS238
G	TYR124
G	ASP203

site_id	CSA16
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
H	LYS238
H	TYR124
H	ASP203

site_id	CSA17
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
A	HIS206
A	LYS238

site_id	CSA18
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
B	HIS206
B	LYS238

site_id	CSA19
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
C	HIS206
C	LYS238

site_id	CSA2
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
B	LYS238
B	TYR123
B	ASP203

site_id	CSA20
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
D	HIS206
D	LYS238

site_id	CSA21
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
E	HIS206
E	LYS238

site_id	CSA22
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
F	HIS206
F	LYS238

site_id	CSA23
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
G	HIS206
G	LYS238

site_id	CSA24
Number of Residues	2
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
H	HIS206
H	LYS238

site_id	CSA25
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
A	TYR123
A	ASP203
B	GLY66

site_id	CSA26
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
A	GLY66
B	TYR123
B	ASP203

site_id	CSA27
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
D	GLY66
C	TYR123
C	ASP203

site_id	CSA28
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
C	GLY66
D	TYR123
D	ASP203

site_id	CSA29
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
F	GLY66
E	TYR123
E	ASP203

site_id	CSA3
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
C	LYS238
C	TYR123
C	ASP203

site_id	CSA30
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
F	TYR123
F	ASP203
E	GLY66

site_id	CSA31
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
H	GLY66
G	TYR123
G	ASP203

site_id	CSA32
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
H	TYR123
H	ASP203
G	GLY66

site_id	CSA4
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
D	LYS238
D	TYR123
D	ASP203

site_id	CSA5
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
E	LYS238
E	TYR123
E	ASP203

site_id	CSA6
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
F	LYS238
F	TYR123
F	ASP203

site_id	CSA7
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
G	LYS238
G	TYR123
G	ASP203

site_id	CSA8
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
H	LYS238
H	TYR123
H	ASP203

site_id	CSA9
Number of Residues	3
Details	Annotated By Reference To The Literature 1ay4

Chain	Residue	Details
A	LYS238
A	TYR124
A	ASP203

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)