1C0K

CRYSTAL STRUCTURE ANALYSIS OF D-AMINO ACID OXIDASE IN COMPLEX WITH L-LACTATE

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003884	molecular_function	D-amino-acid oxidase activity
A	0046416	biological_process	D-amino acid metabolic process
A	0071949	molecular_function	FAD binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	39
Details	BINDING SITE FOR RESIDUE FAD A 1363

Chain	Residue
A	GLY1011
A	ALA1047
A	SER1048
A	TRP1050
A	ALA1051
A	GLY1052
A	ALA1053
A	ASN1054
A	ARG1160
A	THR1161
A	VAL1162
A	SER1012
A	ALA1178
A	THR1179
A	GLY1182
A	THR1201
A	TYR1223
A	ARG1285
A	PRO1286
A	SER1334
A	SER1335
A	ALA1336
A	GLY1013
A	GLY1337
A	TYR1338
A	GLN1339
A	LAC1364
A	HOH3001
A	HOH3002
A	HOH3008
A	HOH3009
A	HOH3035
A	HOH3039
A	VAL1014
A	ILE1015
A	ALA1034
A	ARG1035
A	ASP1036
A	PHE1046

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site_id	AC2
Number of Residues	8
Details	BINDING SITE FOR RESIDUE LAC A 1364

Chain	Residue
A	PHE1058
A	TYR1223
A	ILE1225
A	TYR1238
A	ARG1285
A	SER1335
A	FAD1363
A	HOH3072

---

Functional Information from PROSITE/UniProt

site_id	PS00677
Number of Residues	19
Details	DAO D-amino acid oxidases signature. LVHAYGfSSaGyqqswGaA

Chain	Residue	Details
A	LEU1327-ALA1345

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	23
Details	Signal: {"evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	13
Details	Region: {"description":"Required for dimerization","evidences":[{"source":"PubMed","id":"12208501","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	13
Details	Binding site: {"evidences":[{"source":"PubMed","id":"11070076","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12445787","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1C0I","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0K","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0P","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"11070076","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1C0K","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0P","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"PubMed","id":"12445787","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1C0I","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"11070076","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12445787","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1C0I","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1C0P","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI7
Number of Residues	1
Details	Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00498","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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Catalytic Information from CSA

site_id	CSA1
Number of Residues	2
Details	a catalytic site defined by CSA, PubMed 11070076

Chain	Residue	Details
A	SER1335
A	SER1335

---

site_id	MCSA1
Number of Residues	3
Details	M-CSA 110

Chain	Residue	Details
A	ASN1054	modifies pKa
A	SER1335	hydrogen bond acceptor, hydrogen bond donor, modifies pKa
A	GLN1339	hydrogen bond acceptor, modifies pKa

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