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1B5G

HUMAN THROMBIN COMPLEXED WITH NOVEL SYNTHETIC PEPTIDE MIMETIC INHIBITOR AND HIRUGEN

Functional Information from GO Data
ChainGOidnamespacecontents
H0004252molecular_functionserine-type endopeptidase activity
H0005509molecular_functioncalcium ion binding
H0006508biological_processproteolysis
H0007596biological_processblood coagulation
L0004252molecular_functionserine-type endopeptidase activity
L0005576cellular_componentextracellular region
L0006508biological_processproteolysis
L0007596biological_processblood coagulation
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE 0ZE H 372
ChainResidue
HGLU192
HGLY193
HASP194
HSER195
HSER214
HTRP215
HGLY216
HGLY219
HCYS220
HHOH403
HHOH421
HHOH461
HHOH497
HHOH528
HHOH538
HHIS57
HTYR60
HTRP60
HASP189
HALA190
HCYS191

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA H 391
ChainResidue
HARG221
HLYS224
HHOH505

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA H 392
ChainResidue
HLYS169
HTHR172
HPHE204
HHOH472
HHOH476
HHOH484

site_idAC4
Number of Residues16
DetailsBINDING SITE FOR CHAIN I OF HIRUGEN
ChainResidue
HPHE34
HLYS36
HGLN38
HARG73
HTHR74
HARG75
HTYR76
HLYS81
HILE82
HMET84
HSER153
HHOH450
IHOH446
IHOH462
IHOH523
IHOH536

site_idCAT
Number of Residues3
DetailsACTIVE SITE.
ChainResidue
HHIS57
HASP102
HSER195

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
ChainResidueDetails
HLEU53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
ChainResidueDetails
HASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: Sulfotyrosine => ECO:0000269|PubMed:3513162
ChainResidueDetails
ITYS63
HASP102
HSER195

site_idSWS_FT_FI2
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
ChainResidueDetails
HASN60

219869

PDB entries from 2024-05-15

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