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11BA

BINDING OF A SUBSTRATE ANALOGUE TO A DOMAIN SWAPPING PROTEIN IN THE COMPLEX OF BOVINE SEMINAL RIBONUCLEASE WITH URIDYLYL-2',5'-ADENOSINE

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004519molecular_functionendonuclease activity
A0004522molecular_functionribonuclease A activity
A0004540molecular_functionRNA nuclease activity
A0005576cellular_componentextracellular region
A0016829molecular_functionlyase activity
A0042802molecular_functionidentical protein binding
A0050830biological_processdefense response to Gram-positive bacterium
A0051607biological_processdefense response to virus
B0003676molecular_functionnucleic acid binding
B0004519molecular_functionendonuclease activity
B0004522molecular_functionribonuclease A activity
B0004540molecular_functionRNA nuclease activity
B0005576cellular_componentextracellular region
B0016829molecular_functionlyase activity
B0042802molecular_functionidentical protein binding
B0050830biological_processdefense response to Gram-positive bacterium
B0051607biological_processdefense response to virus
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 127
ChainResidue
AASN67
AHIS119
AUPA125
AHOH150
AHOH165

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 128
ChainResidue
BASN67
BHIS119
BUPA126
BHOH219

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 129
ChainResidue
BASN17
BLYS113
BPRO114
BSER115
BHOH235
BHOH237

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UPA A 125
ChainResidue
ALYS41
AVAL43
AASN44
ATHR45
AASN67
AGLN69
AASN71
AALA109
AHIS119
APHE120
ASO4127
AHOH151
AHOH156
BGLN11
BHIS12

site_idAC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE UPA B 126
ChainResidue
AGLN11
AHIS12
AHOH143
BLYS41
BVAL43
BASN44
BTHR45
BCYS65
BASN67
BGLN69
BASN71
BALA109
BHIS119
BPHE120
BSO4128
BHOH200
BHOH212

site_idAS1
Number of Residues6
DetailsCOMPOSITE ACTIVE SITE
ChainResidue
BHIS12
ALYS41
ATHR45
AHIS119
APHE120
AASP121

site_idAS2
Number of Residues6
DetailsCOMPOSITE ACTIVE SITE
ChainResidue
AHIS119
APHE120
AASP121
BHIS12
ALYS41
ATHR45

Functional Information from PROSITE/UniProt
site_idPS00127
Number of Residues7
DetailsRNASE_PANCREATIC Pancreatic ribonuclease family signature. CKpvNTF
ChainResidueDetails
ACYS40-PHE46

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS12

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Proton donor
ChainResidueDetails
AHIS119

site_idSWS_FT_FI3
Number of Residues5
DetailsBINDING:
ChainResidueDetails
ALYS7
AARG10
ALYS41
ALYS66
AARG85

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Deamidated asparagine; by deterioration => ECO:0000269|PubMed:2057997
ChainResidueDetails
AASN67

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1rbn
ChainResidueDetails
APHE120
AHIS119
AHIS12
ALYS41

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1rbn
ChainResidueDetails
BPHE120
BHIS119
BHIS12
BLYS41

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1rbn
ChainResidueDetails
AHIS119
AHIS12
ALYS41

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1rbn
ChainResidueDetails
BHIS119
BHIS12
BLYS41

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PDB entries from 2024-07-31

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