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9VH0

SIRT2-H187A structure in complex with H3K18myr peptide and native NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2025-04-04
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97861
Spacegroup nameP 1
Unit cell lengths37.434, 48.130, 96.194
Unit cell angles100.19, 91.58, 112.17
Refinement procedure
Resolution47.129 - 2.410
Rwork0.198
R-free0.27330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4x3o
RMSD bond length0.006
RMSD bond angle1.656
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0430 (refmacat 0.4.105))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.1302.500
High resolution limit [Å]2.4102.410
Number of reflections216382145
<I/σ(I)>8.9
Completeness [%]92.1
Redundancy3.7
CC(1/2)0.9950.809
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52890.1 M MES 5.5, 9.2% PEG10000

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PDB entries from 2025-11-12

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