Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9S2D

KHNYN exPIN nuclease

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2024-05-25
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9537
Spacegroup nameP 41
Unit cell lengths54.718, 54.718, 110.851
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.720 - 2.350
R-factor0.2015
Rwork0.198
R-free0.27780
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.139
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]54.7202.390
High resolution limit [Å]2.3502.350
Number of reflections13672664
<I/σ(I)>5.5
Completeness [%]100.0
Redundancy12.6
CC(1/2)0.9950.875
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5291100 mM bis-tris-propane HCl pH 6.5, 200 mM NaF, and 20 % (v/v) PEG 3350.

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon