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9RXQ

Structure of the PDZ1 domain from human NHERF1 with the C-terminal residues (KSTQF) of human URAT1 transporter (SLC22A12)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-01
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.96770
Spacegroup nameP 21 21 21
Unit cell lengths47.923, 51.469, 63.266
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.200 - 1.380
R-factor0.1616
Rwork0.160
R-free0.18260
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.040
Data reduction softwareXDS
Refinement softwarePHENIX (1.21_5207)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.410
High resolution limit [Å]1.3801.380
Rmerge0.0910.461
Rpim0.0100.085
Number of reflections323811484
<I/σ(I)>50.19.1
Completeness [%]99.392.1
Redundancy86.856.3
CC(1/2)0.9990.983
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.4293100 mM sodium acetate pH 4.8 200 mM ammonium acetate 24% PEG 4000

247536

PDB entries from 2026-01-14

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