9RXO
Structure of the PDZ2 domain from human PDZK1 (NHERF3) with the C-terminal residues (KSTQF) of human URAT1 transporter (SLC22A12)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-05-23 |
| Detector | DECTRIS EIGER2 X CdTe 16M |
| Wavelength(s) | 0.95373 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 32.618, 39.105, 137.795 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 34.450 - 1.200 |
| R-factor | 0.1675 |
| Rwork | 0.166 |
| R-free | 0.20350 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.037 |
| Data reduction software | autoPROC |
| Data scaling software | STARANISO (2.4.9) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 35.000 | 1.240 |
| High resolution limit [Å] | 1.200 | 1.200 |
| Rmerge | 0.085 | 1.415 |
| Rpim | 0.028 | 0.479 |
| Number of reflections | 49076 | 2304 |
| <I/σ(I)> | 12.1 | 2.1 |
| Completeness [%] | 94.1 | |
| Redundancy | 10.1 | |
| CC(1/2) | 0.992 | 0.562 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 26% PEG 1500 |






