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9QE5

VCB in complex with VHL-binding compound 82

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2023-08-24
DetectorDECTRIS EIGER2 S 16M
Wavelength(s)1.00
Spacegroup nameP 41 2 2
Unit cell lengths94.215, 94.215, 366.025
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.720 - 2.500
R-factor0.246
Rwork0.245
R-free0.27260
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.250
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.1002.650
High resolution limit [Å]2.5002.500
Number of reflections582409182
<I/σ(I)>14.17
Completeness [%]99.6
Redundancy26.7
CC(1/2)0.9990.777
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.72770.1 M sodium cacodylate pH 5.7, 0.2 M magnesium acetate, 12% (w/v) PEG 3350, 5 mM DTT

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