9OAR
Crystal structure of antibody Fab G001-179 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 |
Unit cell lengths | 49.216, 65.929, 122.098 |
Unit cell angles | 89.90, 96.93, 90.03 |
Refinement procedure
Resolution | 26.280 - 1.940 |
R-factor | 0.2582 |
Rwork | 0.213 |
R-free | 0.24760 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.919 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.000 |
High resolution limit [Å] | 1.940 | 1.940 |
Number of reflections | 96860 | 4358 |
<I/σ(I)> | 5.8 | |
Completeness [%] | 89.6 | |
Redundancy | 3.3 | |
CC(1/2) | 0.950 | 0.323 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 20% (w/v) PEG 3350 and 0.2 M ammonium sulfate at pH 6.0 |