9O0X
Co-crystal structure of human TREX1 in complex with an inhibitor
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-11 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 79.049, 153.457, 137.277 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.150 - 1.680 |
R-factor | 0.19774 |
Rwork | 0.197 |
R-free | 0.23860 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.292 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.710 |
High resolution limit [Å] | 1.680 | 4.560 | 1.680 |
Rmerge | 0.074 | 0.040 | 0.975 |
Rmeas | 0.079 | 0.042 | 1.041 |
Rpim | 0.027 | 0.014 | 0.360 |
Total number of observations | 788428 | ||
Number of reflections | 94939 | 5001 | 4684 |
<I/σ(I)> | 8.6 | ||
Completeness [%] | 99.8 | 99.7 | 99.4 |
Redundancy | 8.3 | 8.4 | 7.8 |
CC(1/2) | 0.999 | 0.999 | 0.795 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 20% PEG 600, 0.15M KSCN, 0.1M Tris 7.5 |