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9NQ5

D-Ornithine/D-lysine decarboxylase C387A complexed with HEPES, putrescine, and D-ornithine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2024-10-17
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.978565
Spacegroup nameP 21 21 21
Unit cell lengths89.990, 104.770, 106.260
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution68.670 - 1.740
R-factor0.1797
Rwork0.179
R-free0.20680
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle0.832
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]68.6701.760
High resolution limit [Å]1.7401.740
Number of reflections1032026405
<I/σ(I)>7.221.16
Completeness [%]99.8
Redundancy6.3
CC(1/2)0.9980.261
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M HEPES, pH 7.5, 0.2-0.4 M NaOAc, 20-24% PEG 3350

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