Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9L3R

Human PI3KDELTA in complex with Zandelisib

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.99999
Spacegroup nameP 21 21 21
Unit cell lengths90.890, 109.080, 142.440
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.450 - 2.500
R-factor0.2327
Rwork0.230
R-free0.27760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6pyr
RMSD bond length0.003
RMSD bond angle0.559
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.4502.580
High resolution limit [Å]2.5002.500
Rmerge0.0411.193
Rmeas0.0451.296
Rpim0.0170.499
Number of reflections496704525
<I/σ(I)>18.71.6
Completeness [%]99.999.7
Redundancy6.76.7
CC(1/2)1.0000.858
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.8283.1510% PEG 4000, 100 mM KCl, 1 mM TCEP neutral pH, 10 mM CaCl2, 100 mM MES pH 5.8

250059

PDB entries from 2026-03-04

PDB statisticsPDBj update infoContact PDBjnumon