9L3D

Crystal structure of endo-processive xyloglucanase Xeg5A from Aspergillus oryzae

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SPRING-8 BEAMLINE BL44XU
Synchrotron site	SPring-8
Beamline	BL44XU
Temperature [K]	100
Detector technology	PIXEL
Collection date	2023-05-23
Detector	DECTRIS EIGER X 16M
Wavelength(s)	0.9
Spacegroup name	P 21 21 2
Unit cell lengths	117.038, 119.841, 106.445
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	48.640 - 1.900
R-factor	0.2173
Rwork	0.216
R-free	0.24920
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.008
RMSD bond angle	0.927
Data reduction software	XDS (Jan 10, 2022)
Data scaling software	XDS (Jan 10, 2022)
Phasing software	PHASER (2.8.3)
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	48.640	1.970
High resolution limit [Å]	1.900	1.900
Rmerge	0.175	1.311
Rmeas	0.198
Rpim	0.091	0.712
Number of reflections	117783	11588
<I/σ(I)>	6.6	1
Completeness [%]	99.3	99.3
Redundancy	4.6	4.3
CC(1/2)	0.995	0.575

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	9	293	25% PEG1500 and 0.1 M MMT buffer