9KGR
Discovery of an orally bioavailable reversible covalent SARS-CoV-2 Mpro inhibitor with pan-coronavirus activity
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-02-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.95365 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.611, 106.543, 54.605 |
Unit cell angles | 90.00, 102.34, 90.00 |
Refinement procedure
Resolution | 47.490 - 1.470 |
R-factor | 0.1856 |
Rwork | 0.185 |
R-free | 0.20780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6y2g |
RMSD bond length | 0.006 |
RMSD bond angle | 1.105 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.700 | 1.490 |
High resolution limit [Å] | 1.470 | 1.470 |
Number of reflections | 92033 | 4403 |
<I/σ(I)> | 14.5 | |
Completeness [%] | 99.8 | |
Redundancy | 6.9 | |
CC(1/2) | 0.999 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M Magnesium sulfate heptahydrate, |