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9JV8

Crystal structure of M. tuberculosis EccCb1-D2 domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER TURBO X-RAY SOURCE
Temperature [K]100
Detector technologyCCD
Collection date2020-05-04
DetectorMAR CCD 165 mm
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths37.389, 75.642, 102.524
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.050 - 2.200
R-factor0.1819
Rwork0.177
R-free0.22850
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.009
Data reduction softwareHKL-3000 (2.3.10)
Data scaling softwareSCALEPACK (2.3.10)
Phasing softwarePHASER (1.20.1-4487)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]35.00035.0002.280
High resolution limit [Å]2.2004.7402.200
Rmerge0.0890.0520.245
Rmeas0.0920.0540.255
Rpim0.0250.0150.070
Number of reflections1534616651428
<I/σ(I)>14.5
Completeness [%]99.599.695.6
Redundancy13.913.213.2
CC(1/2)0.9900.9990.986
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.62770.1M Sodium citrate tribasic dihydrate pH 5.6, 20% (v/v) PEG 4000 and 20% (v/v) 2-Propanol

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