9J6E
Crystal structure of BioZ from Agrobacterium tumefaciens in complex with galutaryl-CoA
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-03 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.681, 126.691, 84.856 |
Unit cell angles | 90.00, 102.91, 90.00 |
Refinement procedure
Resolution | 53.540 - 2.150 |
R-factor | 0.1925 |
Rwork | 0.191 |
R-free | 0.23080 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.237 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.260 | 2.260 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.152 | 1.138 |
Rmeas | 0.164 | 1.231 |
Rpim | 0.062 | 0.465 |
Total number of observations | 440854 | 53582 |
Number of reflections | 64224 | 7893 |
<I/σ(I)> | 10.6 | 2 |
Completeness [%] | 95.6 | |
Redundancy | 6.9 | 6.8 |
CC(1/2) | 0.997 | 0.727 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 20% v/v Glycerol, 10% w/v PEG 4000, and 100 mM MES monohydrate, pH 6.5 |