Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9J4N

Crystal structure of E. coli Leucine tRNA with UAG anticodon

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2023-04-13
DetectorADSC QUANTUM 270
Wavelength(s)0.9793
Spacegroup nameP 21 21 2
Unit cell lengths61.365, 114.179, 53.817
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.681 - 2.900
R-factor0.24762
Rwork0.246
R-free0.26961
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle1.680
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6813.331
High resolution limit [Å]2.8972.897
Rmerge0.1911.750
Rmeas0.2001.821
Rpim0.0590.498
Number of reflections4225352
<I/σ(I)>11.11.8
Completeness [%]86.861.7
Redundancy11.513.2
CC(1/2)0.9970.626
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62970.25 M ammonium sulfate, 0.1 M sodium acetate trihydrate, pH 4.6, 32% (w/v) polyethylene glycol monomethyl ether 2000

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon