9H6C
Crystal structure of the E. coli F-plasmid VapBC toxin-antitoxin complex (VapB T3N)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | MAX IV BEAMLINE BioMAX |
| Synchrotron site | MAX IV |
| Beamline | BioMAX |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-09-23 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979261 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 88.974, 88.974, 115.153 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 44.490 - 2.650 |
| R-factor | 0.2334 |
| Rwork | 0.231 |
| R-free | 0.28420 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.931 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 44.500 | 44.500 | 2.570 |
| High resolution limit [Å] | 2.500 | 11.190 | 2.500 |
| Rmerge | 0.093 | 0.026 | 5.796 |
| Rmeas | 0.098 | 0.028 | 6.104 |
| Number of reflections | 18721 | 243 | 1376 |
| <I/σ(I)> | 13.21 | ||
| Completeness [%] | 99.9 | ||
| Redundancy | 10.07 | ||
| CC(1/2) | 0.999 | 0.999 | 0.215 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | 0.2 M Lithium sulphate monohydrate, 0.1 M sodium citrate tribasic dihydrate, 26 % PEG200 |






