9GZH
PDGFRA-T674I in complex with covalent ponatinib derivative 19
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-08-23 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 0.999 |
| Spacegroup name | P 6 |
| Unit cell lengths | 135.920, 135.920, 34.690 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 33.980 - 2.200 |
| R-factor | 0.1834 |
| Rwork | 0.182 |
| R-free | 0.21470 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.630 |
| Data reduction software | XDS (1.14_3260) |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 33.980 | 2.320 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Number of reflections | 19061 | 2353 |
| <I/σ(I)> | 19.17 | 2.89 |
| Completeness [%] | 100.0 | |
| Redundancy | 20 | |
| CC(1/2) | 0.990 | 0.850 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 5 mg/mL, 18% PEG3350, 100 mM KCl |






