9GBF
X-RAY structure of PHDvC5HCH tandem domain of NSD2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.998 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 36.131, 45.249, 60.646 |
Unit cell angles | 90.00, 99.65, 90.00 |
Refinement procedure
Resolution | 4.970 - 1.760 |
R-factor | 0.1918 |
Rwork | 0.188 |
R-free | 0.22810 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.019 |
RMSD bond angle | 1.607 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.000 | 1.773 |
High resolution limit [Å] | 1.601 | 1.601 |
Number of reflections | 17296 | 865 |
<I/σ(I)> | 9.7 | |
Completeness [%] | 87.3 | |
Redundancy | 3.3 | |
CC(1/2) | 0.997 | 0.483 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 28% PEG Smear Medium, 0.1M HEPES, pH 7.5, 0.05M magnesium sulfate |