9F95
Complex of phenazine biosynthesis enzyme PhzF with 2-amino-3-hydroxy-5-(3-hydroxyphenyl)benzoic acid
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, DESY BEAMLINE P11 |
Synchrotron site | PETRA III, DESY |
Beamline | P11 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-04-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 56.257, 56.257, 156.409 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.720 - 1.460 |
R-factor | 0.1413 |
Rwork | 0.140 |
R-free | 0.16770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.950 |
Data reduction software | XDS (Jan 10, 2022) |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.720 | 1.540 |
High resolution limit [Å] | 1.460 | 1.460 |
Rmerge | 0.064 | 0.971 |
Rmeas | 0.066 | 0.997 |
Rpim | 0.015 | 0.226 |
Number of reflections | 50874 | 7307 |
<I/σ(I)> | 20 | 2.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 18.9 | 19.2 |
CC(1/2) | 1.000 | 0.892 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 2-amino-3-hydroxy-5-(3-hydroxyphenyl)benzoic acid (42 mM), propan-2-ol (19%), glycerol (5%), PEG 4000 (19%), sodium citrate (pH 5.6, 95 mM) |