9EY8
Crystal structure of human tyrosinase-related protein 1 (TYRP1) in complex with (s)-amino-L-tyrosine
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-08 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.965459 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.972, 126.973, 212.339 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.260 - 2.200 |
R-factor | 0.1913 |
Rwork | 0.189 |
R-free | 0.23270 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.028 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.260 | 2.220 |
High resolution limit [Å] | 2.198 | 2.200 |
Rmerge | 0.089 | 1.377 |
Rmeas | 0.105 | |
Rpim | 0.056 | 0.927 |
Number of reflections | 234158 | 6894 |
<I/σ(I)> | 8.29 | 0.59 |
Completeness [%] | 99.5 | 88.35 |
Redundancy | 3.4 | 2.9 |
CC(1/2) | 0.996 | 0.395 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | Sodium bromide, Bis-Tris propane, PEG 3350 |