9EN0
KOD-H4 DNA polymerase mutant in a unproductive binary complex with DNA:DNA containing six HNA nucleotides
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000020 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.081, 112.312, 77.971 |
Unit cell angles | 90.00, 108.50, 90.00 |
Refinement procedure
Resolution | 44.720 - 2.510 |
R-factor | 0.2278 |
Rwork | 0.226 |
R-free | 0.28550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.656 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.720 | 2.450 |
High resolution limit [Å] | 2.310 | 2.310 |
Number of reflections | 95106 | 15434 |
<I/σ(I)> | 3.48 | |
Completeness [%] | 97.0 | 97 |
Redundancy | 1.82 | |
CC(1/2) | 0.989 | 0.104 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 10% w/v PEG 4000, 20% v/v glycerol, 0.02 M d-glucose, 0.02 M d-mannose, 0.02 M d-galactose, 0.02 M l-fucose, 0.02 M d-xylose, 0.02 M N-acetyl-d-glucosamine, 0.1 M MES/imidazole pH 6.5 |