9EKD
Structure of a C1r Zymogen Fragment Bound to SALO
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-06-26 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.00 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 117.831, 117.831, 190.582 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.290 - 3.280 |
R-factor | 0.2459 |
Rwork | 0.242 |
R-free | 0.28650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.001 |
RMSD bond angle | 0.427 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21rc1_5127) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.420 |
High resolution limit [Å] | 3.280 | 7.100 | 3.300 |
Rmerge | 0.226 | 0.162 | 2.218 |
Rmeas | 0.233 | 0.167 | 2.295 |
Rpim | 0.055 | 0.039 | 0.585 |
Number of reflections | 23755 | 2548 | 2328 |
<I/σ(I)> | 6.7 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 17.7 | 18.3 | 15.2 |
CC(1/2) | 0.930 | 0.992 | 0.514 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M BIS-TRIS (pH 5.6), 0.2 M ammonium sulfate, 20% (w/v) PEG-3350 |