Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9EBM

Piperazate synthase (PipS) in complex with haem and N5-OH-L-ornithine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-11-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97936
Spacegroup nameP 61 2 2
Unit cell lengths67.002, 67.002, 479.001
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution79.830 - 1.920
R-factor0.1758
Rwork0.174
R-free0.21160
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.893
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]79.8301.970
High resolution limit [Å]1.9201.920
Rpim0.0450.506
Number of reflections508503343
<I/σ(I)>13.32
Completeness [%]100.0
Redundancy27.3
CC(1/2)0.9980.778
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.76 M sodium citrate tribasic dihydrate, 0.1 M sodium cacodylate, pH 6.5

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon