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9E6Y

Structure of CD112 (Nectin-2) domain 1 bound to CD112R (PVRIG)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]298
Detector technologyPIXEL
Collection date2022-10-12
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 43 21 2
Unit cell lengths79.650, 79.650, 81.380
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.240 - 2.200
R-factor0.2096
Rwork0.208
R-free0.24540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.561
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.2402.279
High resolution limit [Å]2.2002.200
Number of reflections138261362
<I/σ(I)>17.6
Completeness [%]99.9
Redundancy19.57
CC(1/2)0.9990.645
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP9.52980.1M CHES PH 9.5, 20% W/V PEG 8000

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