9DP1
APE1 N174A Substrate Complex with Abasic DNA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 4.2.2 |
| Synchrotron site | ALS |
| Beamline | 4.2.2 |
| Temperature [K] | 100 |
| Detector technology | CMOS |
| Collection date | 2021-10-08 |
| Detector | RDI CMOS_8M |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 1 |
| Unit cell lengths | 43.943, 60.498, 73.075 |
| Unit cell angles | 81.81, 75.60, 88.73 |
Refinement procedure
| Resolution | 25.060 - 2.290 |
| R-factor | 0.2312 |
| Rwork | 0.230 |
| R-free | 0.25060 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.705 |
| Data reduction software | XDS |
| Data scaling software | HKL-3000 (705c) |
| Phasing software | PHENIX (1.19.2-4158-000) |
| Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 25.060 | 2.340 |
| High resolution limit [Å] | 2.290 | 2.290 |
| Rmeas | 0.133 | 0.215 |
| Number of reflections | 29791 | 1460 |
| <I/σ(I)> | 7.6 | 4.39 |
| Completeness [%] | 96.6 | 97.3 |
| Redundancy | 2.5 | 2.6 |
| CC(1/2) | 0.915 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 295 | 100 mM sodium citrate, pH 5.0, 200 mM magnesium chloride, 16-21% PEG20000 |






