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9DP1

APE1 N174A Substrate Complex with Abasic DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2021-10-08
DetectorRDI CMOS_8M
Wavelength(s)1.00
Spacegroup nameP 1
Unit cell lengths43.943, 60.498, 73.075
Unit cell angles81.81, 75.60, 88.73
Refinement procedure
Resolution25.060 - 2.290
R-factor0.2312
Rwork0.230
R-free0.25060
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.705
Data reduction softwareXDS
Data scaling softwareHKL-3000 (705c)
Phasing softwarePHENIX (1.19.2-4158-000)
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0602.340
High resolution limit [Å]2.2902.290
Rmeas0.1330.215
Number of reflections297911460
<I/σ(I)>7.64.39
Completeness [%]96.697.3
Redundancy2.52.6
CC(1/2)0.915
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP295100 mM sodium citrate, pH 5.0, 200 mM magnesium chloride, 16-21% PEG20000

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