9DF3
EGFR Exon20 insertion mutant SVD bound with (S)-3-((3-chloro-2-methoxyphenyl)amino)-2-(3-((tetrahydrofuran-2-yl)methoxy)pyridin-4-yl)-1,5,6,7-tetrahydro-4H-pyrrolo[3,2-c]pyridin-4-one
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-06-11 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.99984 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 40.060, 107.240, 175.290 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.780 - 1.680 |
R-factor | 0.17169 |
Rwork | 0.170 |
R-free | 0.19970 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.429 |
Data reduction software | XDS |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.780 | 1.730 |
High resolution limit [Å] | 1.680 | 1.680 |
Rmerge | 0.083 | 1.664 |
Rmeas | 0.089 | 1.786 |
Rpim | 0.033 | 0.645 |
Number of reflections | 43682 | 2167 |
<I/σ(I)> | 19.3 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.4 | |
CC(1/2) | 0.999 | 0.816 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 291 | 0.8 microliters 7.7 mg/mL protein mixed 1:1 with 100mM MES pH 6.2, 600 mM NaCl, 14% w/v PEG 4000. 0.2 microliters of 100 mM spermidine added to drop |