Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9DBA

Co-Bound Structure of Computationally Designed Homotrimer Tet4

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-26
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.605130
Spacegroup nameH 3
Unit cell lengths72.260, 72.260, 56.830
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.070 - 2.200
R-factor0.232
Rwork0.227
R-free0.28230
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.675
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.17_3644)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.0702.279
High resolution limit [Å]2.2002.200
Rmerge0.0410.162
Rmeas0.0450.192
Rpim0.0200.101
Number of reflections106091594
<I/σ(I)>28.946.63
Completeness [%]99.597.82
Redundancy4.83.3
CC(1/2)0.9970.967
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529825% PEG 400, 200 mM NaCl, 100 mM Bis-Tris (pH 5.5)

239803

PDB entries from 2025-08-06

PDB statisticsPDBj update infoContact PDBjnumon