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9DB7

Crystal structure of NDM-1 complexed with compound 22

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.978
Spacegroup nameP 1 21 1
Unit cell lengths56.772, 58.685, 62.242
Unit cell angles90.00, 90.89, 90.00
Refinement procedure
Resolution42.730 - 1.780
R-factor0.16373
Rwork0.161
R-free0.21227
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.622
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.810
High resolution limit [Å]1.7801.780
Rmerge0.0670.307
Number of reflections385001853
<I/σ(I)>21.632.57
Completeness [%]98.1
Redundancy4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1 M Bis Tris pH 7.5, 25% PEG 3350

243531

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