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9DAG

Crystal structure of NDM-1 complexed with compound 13

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-14
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 1 21 1
Unit cell lengths41.313, 58.361, 43.159
Unit cell angles90.00, 93.40, 90.00
Refinement procedure
Resolution43.080 - 1.840
R-factor0.1654
Rwork0.163
R-free0.22203
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.601
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.870
High resolution limit [Å]1.8401.840
Rmerge0.1040.381
Number of reflections17427862
<I/σ(I)>14.192.05
Completeness [%]97.4
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1 M Bis Tris pH 7.5, 25% PEG 3350

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