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9CYR

Crystal structure of D245G mutant human PTP1B (PTPN1) at room temperature (298 K)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-1
Synchrotron siteSSRL
BeamlineBL12-1
Temperature [K]298
Detector technologyPIXEL
Collection date2024-02-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97946
Spacegroup nameP 31 2 1
Unit cell lengths89.579, 89.579, 106.234
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.790 - 1.650
R-factor0.1674
Rwork0.167
R-free0.18580
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.124
Data reduction softwareDIALS (3.7.1)
Data scaling softwareAimless (0.8.2)
Phasing softwareMOLREP (11.0)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.7901.709
High resolution limit [Å]1.6501.650
Rmerge0.0531.719
Rmeas0.0561.853
Rpim0.0180.680
Number of reflections596635868
<I/σ(I)>16.671.02
Completeness [%]99.999.16
Redundancy9.77.2
CC(1/2)1.0000.417
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52770.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13.5% PEG 8000, 2% ethanol

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PDB entries from 2024-08-21

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