9CSY
SARS-CoV-2 papain-like protease (PLpro) bound to PF-07957472
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-31 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.95374 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.866, 99.662, 188.682 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.150 - 2.595 |
R-factor | 0.236 |
Rwork | 0.235 |
R-free | 0.25900 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.860 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.8 (22-FEB-2023)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.510 | 2.690 |
High resolution limit [Å] | 2.590 | 2.590 |
Rpim | 0.055 | 0.820 |
Number of reflections | 30611 | 193 |
<I/σ(I)> | 7.75 | |
Completeness [%] | 73.8 | 52.2 |
Redundancy | 13.4 | 13.7 |
CC(1/2) | 0.993 | 0.976 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M Sodium citrate tribasic dihydrate pH 5.0, 30% v/v Jeffamine ED-2001 pH 7.0 |