9C18
Human biliverdin IX beta reductase in complex with NADP in space group P1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-04-02 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9201 |
Spacegroup name | P 1 |
Unit cell lengths | 41.940, 41.977, 60.212 |
Unit cell angles | 84.11, 87.24, 63.66 |
Refinement procedure
Resolution | 31.880 - 1.900 |
R-factor | 0.2071 |
Rwork | 0.206 |
R-free | 0.22920 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 9c16 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.980 |
Data reduction software | autoPROC |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.880 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.196 | 1.996 |
Rmeas | 0.231 | 2.330 |
Rpim | 0.120 | 1.196 |
Number of reflections | 28264 | 1414 |
<I/σ(I)> | 4.3 | 0.7 |
Completeness [%] | 97.8 | |
Redundancy | 3.6 | |
CC(1/2) | 0.988 | 0.367 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1 M MES pH 6.5, 12% (w/v) PEG20000, 25% (v/v) MPD, 1 mM NADP+ |