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9B3B

Structure of TDP1 complexed with compound IB09

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-05
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths50.023, 104.748, 193.241
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.140 - 1.620
R-factor0.1616
Rwork0.160
R-free0.18940
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.018
RMSD bond angle1.443
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.650
High resolution limit [Å]1.6201.620
Rpim0.0270.297
Number of reflections1223365701
<I/σ(I)>24.72
Completeness [%]94.2
Redundancy5.2
CC(1/2)0.9990.803
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52910.1M MOPS/HEPES pH 7.5, 10% (w/v) PEG 8000, 20% (w/v) ethylene glycol, 0.03M sodium fluoride, 0.03 M sodium bromide, 0.03 sodium iodide

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