9B0C
Crystal structure of GenB2 in complex with gentamicin X2.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-08-02 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.976250 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 75.407, 104.187, 104.653 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.640 - 1.660 |
R-factor | 0.1667 |
Rwork | 0.165 |
R-free | 0.19100 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.917 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.640 | 1.370 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmerge | 0.095 | 2.791 |
Rmeas | 0.099 | 2.922 |
Rpim | 0.027 | 0.853 |
Total number of observations | 49002 | |
Number of reflections | 88843 | 4306 |
<I/σ(I)> | 13.2 | 0.9 |
Completeness [%] | 99.9 | |
Redundancy | 13.1 | 11.4 |
CC(1/2) | 0.999 | 0.458 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M PIPES, pH 6.0, 1 M NaCl, 29% PEG 4000 and 30% 6-aminohexanoic acid |