9VFL
Crystal structure of PLCG1 SH2(C) domain with a triple Tyr phosphorylated peptide derived from NTRK1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL10U2 |
| Synchrotron site | SSRF |
| Beamline | BL10U2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-07-07 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.96183 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 157.690, 157.690, 158.200 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 70.700 - 2.400 |
| R-factor | 0.2176 |
| Rwork | 0.215 |
| R-free | 0.25910 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.541 |
| Data reduction software | XDS (Jun 30, 2023) |
| Data scaling software | Aimless (0.7.7) |
| Phasing software | PHENIX (1.21.1_5286) |
| Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 70.700 | 4.160 | 2.550 |
| High resolution limit [Å] | 2.400 | 3.600 | 2.400 |
| Number of reflections | 78013 | 8155 | 12465 |
| <I/σ(I)> | 15.71 | ||
| Completeness [%] | 100.0 | 100 | 100 |
| Redundancy | 26.5 | ||
| CC(1/2) | 1.000 | 0.999 | 0.663 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M NaCl, 0.1 M phosphate-citrate, pH 4.2, 20% PEG8000 |






