Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9PUO

Neutralizing monoclonal antibody Fab fragment bound to leptin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-17
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 1
Unit cell lengths51.927, 48.534, 124.963
Unit cell angles90.34, 85.21, 70.42
Refinement procedure
Resolution40.170 - 3.100
R-factor0.2403
Rwork0.236
R-free0.27720
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.572
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.050
High resolution limit [Å]3.0008.1303.000
Rmerge0.1480.0330.883
Rmeas0.2000.0441.227
Rpim0.1350.0300.849
Total number of observations38063
Number of reflections206071097820
<I/σ(I)>5.2
Completeness [%]88.995.166.5
Redundancy1.821.4
CC(1/2)0.9400.9780.478
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.4293Protein at 25 mg/ml in 20 mM Hepes pH 7.4 and 75 mM sodium chloride versus a reservoir with 18% PEG 8,000 and 20% glycerol.

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon