9NR2
Crystal structure of H5 hemagglutinin from the influenza virus A/black swan/Akita/1/2016 with LSTa
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-1 |
| Synchrotron site | SSRL |
| Beamline | BL12-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-12-17 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 187.241, 100.397, 132.067 |
| Unit cell angles | 90.00, 125.93, 90.00 |
Refinement procedure
| Resolution | 35.650 - 2.710 |
| R-factor | 0.2258 |
| Rwork | 0.223 |
| R-free | 0.27200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.486 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.21.2_5419: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 35.650 | 2.760 |
| High resolution limit [Å] | 2.710 | 2.710 |
| Rmeas | 0.240 | 1.500 |
| Rpim | 0.100 | 0.630 |
| Number of reflections | 52384 | 5206 |
| <I/σ(I)> | 13.2 | |
| Completeness [%] | 97.7 | |
| Redundancy | 6.2 | |
| CC(1/2) | 0.980 | 0.630 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2M sodium iodide, 20% PEG 3350 |






