9E6Y
Structure of CD112 (Nectin-2) domain 1 bound to CD112R (PVRIG)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 298 |
| Detector technology | PIXEL |
| Collection date | 2022-10-12 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 79.650, 79.650, 81.380 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 36.240 - 2.200 |
| R-factor | 0.2096 |
| Rwork | 0.208 |
| R-free | 0.24540 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.561 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 36.240 | 2.279 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Number of reflections | 13826 | 1362 |
| <I/σ(I)> | 17.6 | |
| Completeness [%] | 99.9 | |
| Redundancy | 19.57 | |
| CC(1/2) | 0.999 | 0.645 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 298 | 0.1M CHES PH 9.5, 20% W/V PEG 8000 |






