8ZVO
AtKAI2 apo structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AichiSR BEAMLINE BL2S1 |
Synchrotron site | AichiSR |
Beamline | BL2S1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-10-05 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.12 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.700, 55.790, 52.870 |
Unit cell angles | 90.00, 115.94, 90.00 |
Refinement procedure
Resolution | 47.540 - 1.490 |
R-factor | 0.1477 |
Rwork | 0.146 |
R-free | 0.17240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jym |
RMSD bond length | 0.006 |
RMSD bond angle | 0.913 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.540 | 1.580 |
High resolution limit [Å] | 1.490 | 1.490 |
Rmerge | 0.045 | 0.313 |
Number of reflections | 42773 | 12465 |
<I/σ(I)> | 18.95 | 4.45 |
Completeness [%] | 96.7 | |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M Tris-HCl (pH 7.0 to 9.0) with 1.25 to 2.0 M ammonium sulfate and 12% (v/v) glycerol |